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Chapter 4: Effective Search Strategies for Systematic Reviews of Medical Tests

Methods Guide – Chapter

This is a chapter from AHRQ's Methods Guide for Medical Test Reviews.

Abstract

This chapter discusses appropriate techniques for developing search strategies for systematic reviews of medical tests. It offers general advice for searching for systematic reviews and also addresses issues specific to systematic reviews of medical tests. Diagnostic search filters are currently not sufficiently developed for use when searching for systematic reviews. Instead, authors should construct a highly sensitive search strategy that uses both controlled vocabulary and text words. A comprehensive search should include multiple databases and sources of grey literature. A list of subject-specific databases is provided.

Introduction

Locating all published studies relevant to the key questions is a goal of all systematic reviews. Inevitably, systematic reviewers encounter variation in whether or how a study is published and in how the elements of a study are reported in the literature or indexed by organizations such as the National Library of Medicine. A systematic search must attempt to overcome these issues in order to identify all relevant studies, taking into account the usual constraints on time and resources.

Although I have written this chapter of the Methods Guide for Medical Test Reviews (also referred to as the Medical Test Methods Guide) as guidance for Evidence-based Practice Centers (EPCs), I hope it will also serve as a useful resource for other investigators interested in conducting systematic reviews on medical tests and in particular for the librarian or information specialist conducting the search. Searching for genetic tests and prognostic studies is covered in chapters 11 and 12 of this Medical Test Methods Guide.

While this chapter will discuss issues specific to systematic reviews of medical tests, (including screening, diagnostic, and prognostic tests), it is important to remember that general guidance on searching for systematic reviews1 also applies. Literature searches will always seek a balance between recall (how much of the relevant literature is located) and precision (how much of the retrieved literature is relevant). The optimal balance depends on context. Within the context of comparative effectiveness research, the goal is to have a comprehensive (if not exhaustive) search while still trying to minimize the resources necessary for review of the retrieved citations.

In general, bibliographic searches for systematic reviews in health care should always include MEDLINE® and the Cochrane Central Register of Controlled Trials. Additional databases that are often useful to search include Embase®, CINAHL® and PsychINFO®. When constructing the searches in these bibliographic databases, it is important to use both controlled and uncontrolled vocabulary and to tailor the search for each individual database. Limits such as age and language should not be used unless a specific case can be made for their use.

Working closely with the research team and reviewing the analytic framework and inclusion and exclusion criteria will help to develop the search strategy. Reading the references of all included studies is a useful technique to identify additional studies, as is using a citation database such as Scopus® or Web of Science® to find articles that have cited key articles that have already been retrieved. In addition to published literature, a comprehensive search will include looking for unpublished or “grey literature.” In the context of comparative effectiveness research, regulatory information, clinical trial registries, and conference proceedings/abstracts are the most useful sources for identifying data.

Common Challenges

Systematic reviews of test strategies for a given condition require a search for each of the relevant test strategies under consideration. In conducting the search, systematic reviewers may use one of two approaches. Either the reviewers may search on all possible tests used to evaluate the given disease, which requires knowing all the possible test strategies available, or they may search on the disease or condition and then focus on medical test evaluation for that disease.

When a review focuses on specific named tests, searching is relatively straightforward. The names of the tests can be used to locate studies, and a specific search for the concept of diagnosis, screening or prognosis may not be necessary.2, 3 But because testing strategies are constantly evolving, using the strategy of relying on specific named tests may risk missing emerging approaches. Tests that measure a gene product may be associated with multiple diseases, so searching by test name alone may be insufficient. It is often advisable to search for the target illness in addition to known test names, or for the target illness alone if specific tests are unknown. However, searches for a disease or condition are broader searches and greatly increase the burden of work in filtering down to the relevant studies on medical test evaluation.

Principles for Addressing the Challenges

Principle 1: Do not rely on search filters alone.

Several search filters (sometimes called “hedges”), which are pre-prepared and tested searches that can be combined with searches on a particular disease or condition, have been developed to aid systematic reviewers evaluating medical tests. Most of these filters have been developed for MEDLINE.2–6 One filter in particular7 is used in the PubMed® Clinical Queries for diagnosis (Table 4–1). Search filters have also been developed specifically for diagnostic imaging8 and for Embase.9,10

Table 4–1. Diagnosis clinical query for PubMed
Category Optimization Sensitivity/Specificity PubMed Search String
Diagnosis Sensitivity/breadth 98% / 74% (sensitiv*[Title/Abstract] OR sensitivity and specificity[MeSH Terms] OR diagnos*[Title/Abstract] OR diagnosis[MeSH:noexp] OR diagnostic* [MeSH:noexp] OR diagnosis,differential[MeSH:noexp] OR diagnosis[Subheading:noexp])
Specificity/ narrowness 64% / 98% (specificity[Title/Abstract])

Unfortunately, although these search filters are useful for the casual searcher who simply needs some good articles on diagnosis, they are inappropriate for use in systematic reviews of clinical effectiveness. Several researchers6,11–14 have reported that using these filters for systematic reviews may result in relevant studies being missed. Vincent found that most of the available filters perform better when they are being evaluated than when they are used in the context of an actual systematic review;13 this finding is particularly true for studies published before 1990 because of nonstandardized reporting and indexing of medical test studies.

In recent years, improved reporting and indexing of randomized controlled trials (RCTs) have made such trials much easier to find. There is reason to believe that reporting and indexing of medical test studies will similarly improve in the future.12 In fact, Kastner and colleagues15 recently reviewed 22 systematic reviews of diagnostic accuracy published in 2006 to determine whether the PubMed Clinical Queries Filter for diagnosis would be sufficient to locate all the primary studies that the 22 systematic reviews had identified through traditional search strategies. Using these filters in MEDLINE and Embase, the authors found 99 percent of the articles in the systematic reviews they examined, and they determined that the missed articles would not have altered the conclusions of the systematic reviews. The authors therefore concluded that filters may be appropriate when searching for systematic reviews of medical test accuracy. However, until more evidence of their effectiveness is found, we recommend that searchers not rely on them exclusively.

Principle 2: Do not rely on controlled vocabulary (subject headings) alone.

When searching, it is important to use all known variants of the test name such as abbreviations, generic and proprietary names, as well as international terms and spellings, and these may not all be controlled vocabulary terms. Because reporting and indexing of studies of medical tests is so variable, one cannot rely on controlled vocabulary terms alone.3

Using textwords for particular medical tests will help to identify medical test articles that have not yet been indexed or that have not been indexed properly.2 Filters may suggest the sort of textwords that may be appropriate. Michel16 discusses appropriate MeSH headings and other terminology useful for searching for medical tests.

Principle 3: Search in multiple locations.

Always—but in particular with searches for studies of medical tests—we advise systematic reviewers to search more than one database and to tailor search strategies to each individual database.17 Because there can be little overlap between many databases,18–20 failure to search additional databases carries a risk of bias.21–23 For more information on potentially appropriate databases to use see Table 4–2.

Table 4–2. Specalized databases
Database URL Topic Coverage
Free Databases
The Campbell Library http://www.campbellcollaboration.org/library.php Library of Systematic Reviews, Protocols, Reviews of Reviews and Trials for Social Sciences (Similar to Cochrane Library)
ERIC (Education Resources Information Center) http://www.eric.ed.gov Education, including the education of health care professionals as well as educational interventions for patients
IBIDS (International Bibliographic Information on Dietary Supplements) http://ods.od.nih.gov/Health_Information/IBIDS.aspx Dietary supplements
ICL (Index to Chiropractic Literature) http://www.chiroindex.org Chiropractic
NAPS (new Abstracts and Papers in Sleep) http://www.websciences.org/bibliosleep/naps/default.html Sleep
OTseeker (Occupational Therapy Systematic Evaluation of Evidence) http://www.otseeker.com Occupational therapy
PEDRo (Physiothrarpy Evidence Database) http://www.pedro.org.au/ Physical therapy
PILOTS http://www.ptsd.va.gov/ptsd_adv_search.asp PTSD and traumatic stress
PopLine http://www.popline.org Population, family planning & reproductive health
PubMed http://www.ncbi.nlm.nih.gov/pubmed Biology and health sciences
RDRB (Research and Development Resource Base) http://www.rdrb.utoronto.ca/about.php Medical education
RehabData http://www.naric.com/research/rehab Rehabilitation
Social Care Online http://www.scie-socialcareonline.org.uk Social care including: healthcare, social work & mental health
TOXNET http://toxnet.nlm.nih.gov Toxicology, Environmental health adverse effects
TRIS (Transportation Research Information Service) http://ntlsearch.bts.gov/tris/index.do Transportation research
WHO Global Health Library http://www.who.int/ghl/medicus/en/ International biomedical topics. Global Index Medicus
Subscription Databases
AgeLine http://www.csa.com/factsheets/ageline-set-c.php Aging, health topics of interest to people over 50
AMED (Allied and Complimentary Medicine Database) http://www.ovid.com/site/catalog/DataBase/12.jsp Complementary medicine and allied health
ASSIA (Applied Social Science Index and Abstracts) http://www.csa.com/factsheets/assia-set-c.php Applied social sciences including: anxiety disorders, geriatrics, health, nursing, social work and substance abuse
BNI (British Nursing Index) http://www.bniplus.co.uk/about_bni.html Nursing and midwifery
ChildData http://www.childdata.org.uk/ Child-related topics, including child health
CINAHL (Cumulative Index to Nursing and Allied Health) http://www.ebscohost.com/cinahl Nursing and allied health
CommunityWISE http://www.oxmill.com/communitywise/ Community issues, including community health
Embase http://www.embase.com Biomedical, with and emphases on drugs and pharmaceuticals, more non-U.S. coverage than MEDLINE
EMCare http://www.elsevier.com/wps/find/
bibliographicdatabasedescription.cws_home/
708272/description#
description
Nursing and allied health
Global Health http://www.cabi.org/datapage.asp?iDocID=169 International health
HaPI (Health and Psychosocial Instruments) http://www.ovid.com/site/catalog/DataBase/866.jsp Health and psychosocial testing instruments
IPA (international Pharmaceutical Abstracts) http://www.csa.com/factsheets/ipa-set-c.php Drugs and pharmaceuticals
MANTIS (Manual Alternative and Natural Therapy Index System) http://www.healthindex.com/MANTIS.aspx Osteopathy, chiropractic, and alternative medicine
PsycINFO http://www.apa.org/pubs/databases/psycinfo/index.aspx Psychological literature
Sociological Abstracts http://www.csa.com/factsheets/socioabs-set-c.php Sociology, including: health and medicine and the law, social psychology, and substance abuse and addiction
Social Services Abstracts http://www.csa.com/factsheets/ssa-set-c.php Social services, including: mental health services, gerontology, and health policy

Until reporting and indexing are improved and standardized, a combination of highly sensitive searches and brute-force article screening will remain the best approach for systematically searching the medical test literature.6, 11–13 However, this approach is still likely to miss relevant articles; therefore, authors should search additional sources of information. Tracking citations, reading references of relevant articles, and identifying articles that cite key studies are important ways to find additional citations.24 Table 4–3 lists databases that are appropriate for tracking citations.

Table 4-3. Citation tracking databases
Database URL Subscription Status
Google Scholar http://scholar.google.com Free
PubFocus http://pubfocus.com Free
PubReMiner http://bioinfo.amc.uva.nl/human-genetics/pubreminer Free
Scopus http://info.scopus.com Subscription required
Web of Science http://thomsonreuters.com/products_services/science/science_products/a-z... Subscription required

In addition to bibliographic databases and citation analysis, regulatory documents are another potential source of information for systematic reviews of medical reviews. The FDA regulates many medical tests as devices. The regulatory documents for diagnostic tests are available on the FDA’s Device Web site: www.accessdata.fda.gov/scripts/cdrh/devicesatfda/.

Illustration: Contrasting Search Strategies

Two contrasting search strategies may help illustrate these principles. In the AHRQ report, Testing for BNP and NT-proBNP in the Diagnosis and Prognosis of Heart Failure,25 the medical tests in question were known. Therefore, the search consisted of all possible variations on the names of these tests and did not need to include a search string to capture the diagnostic testing concept. By contrast, in the AHRQ report, Effectiveness of Noninvasive Diagnostic Tests for Breast Abnormalities,26 all possible diagnostic tests were not known. For this reason, the search strategy included a search string meant to capture the diagnostic testing concept, and this relied heavily on textwords. The actual search strategy used in PubMed to capture the concept of diagnostic tests was as follows: diagnosis OR diagnose OR diagnostic OR di[sh] OR “gold standard” OR “ROC” OR “receiver operating characteristic” OR sensitivity and specificity[mh] OR likelihood OR “false positive” OR “false negative” OR “true positive” OR “true negative” OR “predictive value” OR accuracy OR precision.

Summary

Key points to keep in mind when developing a search strategy for medical test reviews:

  • Diagnostic search filters—or, more specifically, the reporting and indexing of medical test studies upon which these filters rely—are not sufficiently well developed to be depended upon exclusively for systematic reviews.
  • If the full range of tests is known, one may not need to search for the concept of diagnostic testing; searching for the specific test using all possible variant names may be sufficient.
  • Combining highly sensitive searches utilizing textwords with hand searching and acquisition and review of cited references in relevant papers is currently the best way to identify all or most relevant studies for a systematic review.
  • Do not rely on controlled vocabulary alone.
  • Check Devices@FDA (www.accessdata.fda.gov/scripts/cdrh/devicesatfda/).

References

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Funding

Funding: Funded by the Agency for Health Care Research and Quality (AHRQ) under the Effective Health Care Program.

Disclaimer: The findings and conclusions expressed here are those of the authors and do not necessarily represent the views of AHRQ. Therefore, no statement should be construed as an official position of AHRQ or of the U.S. Department of Health and Human Services.

Public domain notice: This document is in the public domain and may be used and reprinted without permission except those copyrighted materials that are clearly noted in the document. Further reproduction of those copyrighted materials is prohibited without the specific permission of copyright holders.

Accessibility: Persons using assistive technology may not be able to fully access information in this report. For assistance contact EPC@ahrq.hhs.gov.

Conflicts of interest: The author has no affiliations or financial involvements that conflict with the information presented in this chapter.

Corresponding author: Rose Relevo, M.L.I.S., M.S. Oregon Health & Science University, 3181 SW Sam Jackson Park Road, Portland, OR 97217. Phone: 503–220–8262 ext. 51318. Fax: 503–346–6815. Email: relevo@ohsu.edu.

Suggested citation: Relevo R. Effective Search Strategies for Systematic Reviews of Medical Tests. AHRQ Publicaton No. 12-EHC076-EF. Chapter 4 of Methods Guide for Medical Test Reviews (AHRQ Publication No. 12-EHC017). Rockville, MD: Agency for Healthcare Research and Quality; June 2012. Also published in a special supplement to the Journal of General Internal Medicine, July 2012.